Nature Methods Analysis and design of RNA sequencing experiments for identifying mRNA isoform regulation

Supplementary Figure 1 Annotated isoforms in human and mouse genomes. Supplementary Figure 2 Estimates of  using single‐end reads. Supplementary Figure 3 Steps of MISO statistical inference procedure Supplementary Figure 4 Evidence for exon size‐dependent qRT‐PCR bias. Supplementary Figure 5 MISO estimation for 52 alternative exons in breast cancer tissue. Supplementary Figure 6 mRNA‐Seq data for hnRNPAB in breast cancer tissue. Supplementary Figure 7 Comparison of MISO and qRT-PCR values for hnRNP H knockdown dataset 